論文 - 磯貝 隆夫
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Detection of four isomers of the human cytomegalovirus genome using nanopore long-read sequencing.
Nanamiya H, Tanaka D, Hiyama G, Isogai T, Watanabe S
Virus genes 60 ( 4 ) 377 - 384 2024年8月（ ISSN:0920-8569 ）
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Watanabe T, Nanamiya H, Endo Y, Kojima M, Nomura S, Furukawa S, Soeda S, Tamura H, Ryufuku M, Tanaka D, Isogai T, Imai JI, Watanabe S, Fujimori K
Journal of ovarian research 14 ( 1 ) 129 2021年10月
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Clinical relevance of oncogenic driver mutations identified in endometrial carcinoma.
Watanabe T, Nanamiya H, Kojima M, Nomura S, Furukawa S, Soeda S, Tanaka D, Isogai T, Imai JI, Watanabe S, Fujimori K
Translational oncology 14 ( 3 ) 101010 2021年3月（ ISSN:1936-5233 ）
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Muto S, Ozaki Y, Yamaguchi H, Mine H, Takagi H, Watanabe M, Inoue T, Yamaura T, Fukuhara M, Okabe N, Matsumura Y, Hasegawa T, Osugi J, Hoshino M, Higuchi M, Shio Y, Nanamiya H, Imai JI, Isogai T, Watanabe S, Suzuki H
Oncology letters 21 ( 3 ) 203 2021年3月（ ISSN:1792-1074 ）
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Watanabe T, Nanamiya H, Kojima M, Nomura S, Furukawa S, Soeda S, Tanaka D, Isogai T, Imai JI, Watanabe S, Fujimori K
Scientific reports 10 ( 1 ) 18734 2020年10月
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Non-pathogenic Escherichia coli acquires virulence by mutating a growth-essential LPS transporter.
Kaito C, Yoshikai H, Wakamatsu A, Miyashita A, Matsumoto Y, Fujiyuki T, Kato M, Ogura Y, Hayashi T, Isogai T, Sekimizu K
PLoS pathogens 16 ( 4 ) e1008469 2020年4月（ ISSN:1553-7366 ）
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Ozaki Y, Muto S, Takagi H, Watanabe M, Inoue T, Fukuhara M, Yamaura T, Okabe N, Matsumura Y, Hasegawa T, Ohsugi J, Hoshino M, Shio Y, Tanaka D, Nanamiya H, Imai JI, Isogai T, Watanabe S, Suzuki H
Cancer immunology, immunotherapy : CII 69 ( 1 ) 127 - 134 2020年1月（ ISSN:0340-7004 ）
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【日本バイオの技と粋(6)】 日本の完全長cDNAプロジェクトの話
菅野 純夫, 太田 紀夫, 磯貝 隆夫
バイオサイエンスとインダストリー 76 ( 4 ) 320 - 327 2018年7月（ ISSN:0914-8981 ）
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Owada-Ozaki Y, Muto S, Takagi H, Inoue T, Watanabe Y, Fukuhara M, Yamaura T, Okabe N, Matsumura Y, Hasegawa T, Ohsugi J, Hoshino M, Shio Y, Nanamiya H, Imai JI, Isogai T, Watanabe S, Suzuki H
Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer 2018年4月（ ISSN:1556-0864 ）
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Owada Y., Inoue T., Watanabe Y., Fukuhara M., Yamaura T., Muto S., Matsumura Y., Hasegawa T., Tanaka D., Kanno R., Ito E., Nanamiya H., Imai J., Isogai T., Watanabe S., Suzuki H.
Japanese Journal of Cancer and Chemotherapy 44 ( 9 ) 763 - 766 2017年9月（ ISSN:03850684 ）
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[Exploring the Possibility of New Biomarkers of Immune Checkpoint Inhibitors for Non-Small Cell Lung Cancer (NSCLC)].
Owada Y, Inoue T, Watanabe Y, Fukuhara M, Yamaura T, Muto S, Matsumura Y, Hasegawa T, Tanaka D, Kanno R, Ito E, Nanamiya H, Imai J, Isogai T, Watanabe S, Suzuki H
Gan to kagaku ryoho. Cancer & chemotherapy 44 ( 9 ) 763 - 766 2017年9月（ ISSN:0385-0684 ）
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非小細胞肺癌における免疫チェックポイント阻害薬の新たなバイオマーカー抽出の可能性
大和田 有紀, 井上 卓哉, 渡邊 譲, 福原 光朗, 山浦 匠, 武藤 哲史, 松村 勇輝, 長谷川 剛生, 田中 大輔, 菅野 亮, 伊藤 恵美, 七宮 英晃, 今井 順一, 磯貝 隆夫, 渡辺 慎哉, 鈴木 弘行
癌と化学療法 44 ( 9 ) 763 - 766 2017年9月（ ISSN:0385-0684 ）
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Crea F., Watahiki A., Quagliata L., Xue H., Pikor L., Parolia A., Wang Y., Lin D., Lam W., Farrar W., Isogai T., Morant R., Castori-Eppenberger S., Chi K., Wang Y., Helgason C.
Oncotarget 5 ( 3 ) 764 - 774 2014年1月
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Genome-wide determination of RNA stability reveals hundreds of short-lived non-coding transcripts in mammals.
Tani, H., Mizutani, R., Salam, KA., Tano, K., Ijiri, K., Wakamatsu, A., Isogai, T., Suzuki, Y., Akimitsu, N.,
Genome Res. 22 ( 5 ) 947 - 956 2012年5月
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Identification and Characterization of Novel Genotoxic Stress-inducible Nuclear Long Noncoding RNAs in Mammalian Cells.
Rena Mizutani, Ai Wakamatsu, Noriyuki Tanaka, Hiroshi Yoshida, Naobumi Tochigi, Yoshio Suzuki, Tadahiro Oonishi, Hidenori Tani, Keiko Tano, Kenichi Ijiri, Takao Isogai, Nobuyoshi Akimitsu
PLoS ONE, 7 ( 4 ) e34949 2012年4月
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HGPD: Human Gene and Protein Database, 2012 update
Yukio Maruyam, Yoshifumi Kawamura, Tetsuo Nishikawa, Takao Isogai, Nobuo Nomura, Naoki Goshima
Nucleic Acids Res. 40 D924-D929 2012年
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Statistical analysis of features associated with protein expression/solubility in an in vivo Escherichia coli expression system and a wheat germ cell-free expression system.
Hirose, S., Kawamura, Y., Yokota, K., Kuroita, T., Natsume, T., Komiya, K., Tsutsumi, T., Suwa, Y., Isogai, T., Goshima, N., Noguchi, T.
J Biochem., 150 ( 1 ) 73 - 81 2011年
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Alternative splicing of genes during neuronal differentiation of NT2 pluripotential human embryonal carcinoma cells
Ai Wakamatsu, Jun-ichi Imai, Shinya Watanabe, Takao Isogai
FEBS Letters, 584 4041 - 4047 2010年
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Comparative Analysis of Human Src-family Kinase Substrate Specificity
Takeda, Hiroyuki; Kawamura, Yoshifumi; Miura, Aya; Mori, Masatoshi; Wakamatsu, Ai; Yamamoto, Jun-ichi; Isogai, Takao; Matsumoto, Masaki; Nakayama, Keiichi; Natsume, Tohru; Nomura, Nobuo; Goshima, Naoki
J. Proteome Res. 9 ( 11 ) 5982 - 5993 2010年
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Development of Novel Synthetic Hydrophilic Resin for Drug-Protein Interaction Analysis
Akito Tanaka & Takao Isogai
Frontiers in Drug Design & Discovery 5 41 - 66 2010年
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Identification and Functional Analyses of 11,769 Full-length Human cDNAs Focused on Alternative Splicing
Ai Wakamatsu, Kouichi Kimura, Jun-ichi Yamamoto, Tetsuo Nishikawa, Nobuo Nomura, Sumio Sugano, Takao Isogai
DNA Res. 16 371 - 383 2009年
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Human Gene and Protein Database (HGPD): a novel database presenting a large quantity of experiment-based results in human proteomics
Yukio Maruyama, Ai Wakamatsu, Yoshifumi Kawamura, Kouichi Kimura, Jun-ichi Yamamoto, Tetsuo Nishikawa, Yasutomo Kisu, Sumio Sugano, Naoki Goshima, Takao Isogai, Nobuo Nomura
Nucleic Acids Res. 37 D762-D766 2009年
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Human protein factory for converting the transcriptome into an in vitro–expressed proteome
Naoki Goshima, Yoshifumi Kawamura, Akiko Fukumoto, Aya Miura, Reiko Honma, Ryohei Satoh, Ai Wakamatsu, Jun-ichi Yamamoto, Kouichi Kimura, Tetsuo Nishikawa, Taichi Andoh, Yuki Iida, Kumiko Ishikawa, Emi Ito, Naoko Kagawa, Chie Kaminaga, Kei-ichi Kanehori, Bunsei Kawakami, Kiyokazu Kenmochi, Rie Kimura, Miki Kobayashi, Toshihiro Kuroita, Hisashi Kuwayama, Yukio Maruyama, Kiyoshi Matsuo, Kazuyoshi Minami, Mariko Mitsubori, Masatoshi Mori, Riyo Morishita, Atsushi Murase, Akira Nishikawa, Shigemichi Nishikawa, Toshihiko Okamoto, Noriko Sakagami, Yutaka Sakamoto, Yukari Sasaki, Tomoe Seki, Saki Sono, Akio Sugiyama, Tsuyoshi Sumiya, Tomoko Takayama, Yukiko Takayama, Hiroyuki Takeda, Takushi Togashi, Kazuhide Yahata, Hiroko Yamada, Yuka Yanagisawa, Yaeta Endo, Fumio Imamoto, Yasutomo Kisu, Shigeo Tanaka, Takao Isogai, Jun-ichi Imai, Shinya Watanabe, Nobuo Nomura
Nature Methods 5 1011 - 1017 2008年
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The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts.
Genome Information Integration Project and H-Invitational 2 Consortium
Nucleic Acids Res. 36 D793-D799 2008年
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Differential responses of normal human coronary artery endothelial cells against multiple cytokines comparatively assessed by gene expression profiles.
Miura A, Honma R, Togashi T, Yanagisawa Y, Ito E, Imai J, Isogai T, Goshima N, Watanabe S, Nomura N.
FEBS Lett. 580 6871 - 6879 2006年
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Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs.
Takeda J, Suzuki Y, Nakao M, Barrero RA, Koyanagi KO, Jin L, Motono C, Hata H, Isogai T, Nagai K, Otsuki T, Kuryshev V, Shionyu M, Yura K, Go M, Thierry-Mieg J, Thierry-Mieg D, Wiemann S, Nomura N, Sugano S, Gojobori T, Imanishi T.
Nucleic Acids Res. 34 3917 - 3928 2006年
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Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes
Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano
Genome Res. 16 55 - 65 2006年
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Signal Sequence and Keyword Trap in silico for Selection of Full-Length Human cDNAs Encoding Secretion or Membrane Proteins from Oligo-Capped cDNA Libraries
Tetsuji Otsuki, Toshio Ota, Tetsuo Nishikawa, Koji Hayashi, Yutaka Suzuki, Jun-ichi Yamamoto, Ai Wakamatsu, Kouichi Kimura, Katsuhiko Sakamoto, Naoto Hatano, Yuri Kawai, Shizuko Ishii, Kaoru Ssaito, Shin-ichi Kojima, Tomoyasu Sugiyama, Tetsuyoshi Ono, Kazunori Okano, Yoko Yoshikawa, Satoshi Aotsuka, Naokazu Sasaki, Atsushi Hattori, Koji Okumura, Keiichi Nagai, Sumio Sugano, Takao Isogai.
DNA Res. 12 117 - 126 2005年
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Integrative annotation of 21,037 human genes validated by full-length cDNA clones
Imanishi T, Itoh T, Suzuki Y, O'Donovan C, Fukuchi S, Koyanagi KO, Barrero RA, Tamura T, Yamaguchi-Kabata Y, Tanino M, Yura K, Miyazaki S, Ikeo K, Homma K, Kasprzyk A, Nishikawa T, Hirakawa M, Thierry-Mieg J, Thierry-Mieg D, Ashurst J, Jia L, Nakao M, Thomas MA, Mulder N, Karavidopoulou Y, Jin L, Kim S, Yasuda T, Lenhard B, Eveno E, Suzuki Y, Yamasaki C, Takeda J, Gough C, Hilton P, Fujii Y, Sakai H, Tanaka S, Amid C, Bellgard M, Bonaldo Md Mde F, Bono H, Bromberg SK, Brookes AJ, Bruford E, Carninci P, Chelala C, Couillault C, Souza SJ, Debily MA, Devignes MD, Dubchak I, Endo T, Estreicher A, Eyras E,----,Stodolsky M, Makalowski W, Go M, Nakai K, Takagi T, Kanehisa M, Sakaki Y, Quackenbush J, Okazaki Y, Hayashizaki Y, Hide W, Chakraborty R, Nishikawa K, Sugawara H, Tateno Y, Chen Z, Oishi M, Tonellato P, Apweiler R, Okubo K, Wagner L, Wiemann S, Strausberg RL, Isogai T, Auffray C, Nomura N, Gojobori T, Sugano S.
PLoS Biol. 2 856 - 857 2004年
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Complete sequencing and characterization of 21,243 full-length human cDNAs
Ota, T., Suzuki, Y., Nishikawa, T., Otsuki, T., Sugiyama, T., Irie, R., Wakamatsu, A., Hayashi, K., Sato, H., Nagai, K., Kimura, K., Makita, H., Sekine, M., Obayashi, M., Nishi, T., Shibahara, T., Tanaka, T., Ishii, S., Yamamoto, J., Saito, K., Kawai, Y., Isono, Y., Nakamura, Y., Nagahari, K., Murakami, K., Yasuda, T., Iwayanagi, T., Wagatsuma. M., -----, Nagase, T., Nomura, N., Kikuchi, H., Masuho, Y., Yamashita, R., Nakai, K., Yada, T., Nakamura, Y., Ohara, O., Isogai, T., Sugano, S.
Nature Genet. 36 40 - 45 2004年